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25 March 2022 Chemerin effect on transcriptome of the porcine endometrium during implantation determined by RNA-sequencing
Kinga Orzechowska, Grzegorz Kopij, Lukasz Paukszto, Kamil Dobrzyn, Marta Kiezun, Jan Jastrzebski, Tadeusz Kaminski, Nina Smolinska
Author Affiliations +
Abstract

It is well known that the body's metabolism and reproduction are closely related. Chemerin (CHEM) is one of many biologically active proteins secreted by the adipose tissue involved in the regulation of the energy homeostasis of the organism. In the present study, RNA-sequencing was performed to investigate the differentially expressed genes (DEGs), long non-coding RNAs (lncRNAs), and alternatively spliced (AS) transcripts in the cultured porcine endometrium exposed to chemerin for 24 hours (CHEM; 400 ng/mL) collected during the implantation period (15–16 days of gestation). High-throughput sequencing of transcriptomes was performed on the Illumina NovaSeq 6000 platform (Illumina, USA). In the current study, among all 130 DEGs, 58 were upregulated and 72 were downregulated in the CHEM-treated group. DEGs were assigned to 73 functional annotations. Twelve identified lncRNAs indicated a difference in the expression profile after CHEM administration. Additionally, we detected 386 differentially AS events encompassed 274 protein-coding genes and 2 lncRNAs. All AS events were divided into five alternative splicing types: alternative 3′ splice site (A3SS), 5′ splice site (A5SS), mutually exclusive exons (MXE), retention intron (RI), and skipping exon (SE). Within all AS events, we identified 42 A3SS, 43 A5SS, 53 MXE, 9 RI, and 239 SE. In summary, CHEM affects the transcriptomic profile of the porcine endometrium, controlling the expression of numerous genes, including those involved in the cell migration and adhesion, angiogenesis, inflammation, and steroidogenesis. It can be assumed that CHEM may be an important factor for a proper course of gestation and embryo development.

Summary Sentence

Chemerin takes part in the control of pig embryo implantation process via regulation of endometrial genes expression, including those involved in the cell migration and adhesion, angiogenesis, inflammation, and steroidogenesis.

Graphical Abstract

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© The Author(s) 2022. Published by Oxford University Press on behalf of Society for the Study of Reproduction. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com
Kinga Orzechowska, Grzegorz Kopij, Lukasz Paukszto, Kamil Dobrzyn, Marta Kiezun, Jan Jastrzebski, Tadeusz Kaminski, and Nina Smolinska "Chemerin effect on transcriptome of the porcine endometrium during implantation determined by RNA-sequencing," Biology of Reproduction 107(2), 557-573, (25 March 2022). https://doi.org/10.1093/biolre/ioac063
Received: 3 December 2021; Accepted: 18 March 2022; Published: 25 March 2022
KEYWORDS
chemerin
early pregnancy
implantation
pig
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